I used to be a “by-the-book” breeder when it came to deworming. Every puppy got dewormed early and often, following the standard schedule like clockwork. It’s what all the other breeders were doing, what the charts recommended, and it felt like the responsible thing to do.
But then I started seeing information come out about how we might be deworming too frequently. That discovery led me down a path that completely changed how I approach parasite management.
Some breeders and dog owners still follow these established deworming schedules that begin treating puppies very young, continuing frequently throughout puppyhood, then regularly throughout the dog’s life. These schedules are widely available and often followed without testing to confirm whether parasites are actually present.
But here’s what you need to know: Do we deworm dogs too often? Yes, studies show routine deworming makes worms become drug-resistant 2-3 times faster than testing first. Could a more individualized approach serve our dogs better?

Table of Contents
- Current Common Practice: Routine Puppy Deworming Schedules
- Understanding Dog Parasites: It’s Not Just Worms
- Why Fecal Testing Before Deworming Is More Effective
- Understanding the Dog-Parasite Relationship
- When to Test vs. When to Treat Immediately
- How Often Should Dogs Be Tested for Parasites
- Natural Parasite Prevention Methods for Dogs
- A Balanced Approach to Dog Parasite Management
- Implementing Fecal Testing for Puppies
- The Bottom Line on Puppy Deworming
- Frequently Asked Questions About Dog Deworming
Current Common Practice: Routine Puppy Deworming Schedules
As humans, we often fall back on what we’ve always done or what seems to be the most common practice. It’s natural to follow established routines, especially when they appear to work. However, just like doctors once prescribed antibiotics for every minor ailment (before we understood the consequences of overuse), we’re now learning that frequent deworming without testing may not be best practice.
We’ll be honest: we used to follow the same routine deworming schedules ourselves, simply because we didn’t know better. It was what everyone did, what the charts recommended, and it seemed like the responsible thing to do. But as we learned more about worms becoming resistant to dewormers and testing became more accessible, we realized we might have been over-treating our dogs.
The routine schedule approach made sense when testing wasn’t readily available and drug resistance wasn’t a concern. But with growing evidence that worms are becoming harder to treat and more accessible diagnostic tools, it may be time to reconsider whether we’re over-treating our dogs.
Understanding Dog Parasites: It’s Not Just Worms
When we talk about “deworming,” we’re really talking about treating parasites in general. Dogs can be affected by both worms and non-worm parasites that require different treatments. For more detailed information about dog health topics, check our FAQ section.
Common dog parasites include:
Worm Parasites:
- Roundworms
- Hookworms
- Whipworms
- Tapeworms
Non-Worm Parasites:
- Coccidia (microscopic intestinal parasite)
- Giardia (protozoa causing diarrhea)
- Other protozoan parasites
Each parasite type requires specific medication. A treatment effective for roundworms may not work for giardia, making accurate identification through testing valuable for targeted treatment.
Why Fecal Testing Before Deworming Is More Effective
Rather than following a predetermined puppy deworming schedule, consider starting with dog parasite testing to determine each litter’s actual needs. This individualized approach respects that different litters may have different parasite challenges.
Today’s fecal testing for dogs is more accurate and accessible than ever before. A simple stool sample can tell you whether your puppies actually have parasites and, if so, what type and how many. Many veterinarians can run these tests in-house and have results the same day.
Identifying Specific Dog Parasites Matters
Different parasites require different treatments. For example, the medication that works well for roundworms may not be effective against whipworms or giardia. Testing first allows your veterinarian to choose the most targeted and effective treatment rather than using broad-spectrum dewormers that may not address the specific parasites present.
How to Collect Dog Stool Sample for Testing
Since puppies in the same litter share everything—food bowls, sleeping areas, play spaces—they typically have similar parasite exposure. Testing one or two puppies from a litter can give you a good picture of what the whole group is dealing with. Simply collect a fresh stool sample (about grape-sized) in a clean container or plastic bag within 24 hours of your vet visit. If parasites are found, the entire litter would generally be treated, but you’ll know exactly what you’re treating and can choose the most effective medication.
Why consider fecal testing rather than routine deworming schedules?
- Testing identifies exactly which parasites are present, since different parasites require different treatments
- You can use the most effective medication for the specific parasites found rather than broad-spectrum treatments
- You can monitor treatment effectiveness with follow-up testing
- Testing helps you understand the parasite pressure in your environment
- Reduces risk of deworming side effects in dogs by avoiding unnecessary medication
- If one puppy in a litter tests positive for parasites, it’s generally safe to assume the whole litter has been exposed, since they eat, sleep, and play together constantly. Testing one representative puppy can guide treatment decisions for the entire litter.

Understanding the Dog-Parasite Relationship
It’s important to recognize that the relationship between dogs and parasites isn’t always pathological. According to our longtime and trusted veterinarian, most (if not all) dogs actually have dormant parasites. Healthy adult dogs with good immune systems generally don’t have any issues with these dormant parasites, particularly when their immune systems are mature and functioning well.
The key is distinguishing between normal, manageable parasite loads and problematic infections that require intervention.
When to Test vs. When to Treat Immediately
Immediate treatment is warranted when:
- Puppies show clinical signs (pale gums, poor growth, diarrhea, distended abdomen)
- Dogs are symptomatic regardless of age
- High-risk situations (rescue animals, known exposure, immunocompromised pets)
- Very young puppies in their first few weeks of life
Testing first makes sense when:
- Dogs appear healthy with no clinical signs
- Following up after treatment to confirm efficacy
- Adult dogs on regular prevention protocols
- Making informed decisions about treatment frequency
- You want to minimize medication use while maintaining health
How Often Should Dogs Be Tested for Parasites
Veterinary guidelines suggest conducting fecal examinations at least four times during the first year of life for young animals, as they are more susceptible to parasitic infections. For healthy adults, fecal testing should be conducted at least twice per year.
Puppy Parasite Symptoms to Watch For:
- Pale gums
- Poor growth or weight loss
- Diarrhea or soft stools
- Distended abdomen
- Lethargy or low energy
- Visible worms in stool
- Excessive scooting
If you notice any of these signs, contact your veterinarian immediately for testing and treatment.

Natural Parasite Prevention Methods for Dogs
While conventional treatments remain the gold standard for confirmed infections, supporting your dog’s overall health can help them better manage parasite exposure:
Natural Support and Environmental Management:
- High-quality, balanced diets support immune function
- Some breeders incorporate natural helpers like ground pumpkin seeds mixed into food occasionally, which may help keep parasite loads in check
- Pick up feces immediately and daily from yards to prevent environmental contamination
- Provide fresh, clean water
- Cover sandboxes when not in use
Important Note: Natural approaches should complement, not replace, veterinary care and proven treatments when parasites are confirmed. While things like pumpkin seeds may provide some support, they aren’t a substitute for proper deworming medication when parasites are present.
A Balanced Approach to Dog Parasite Management
The goal isn’t to avoid all deworming—that would be irresponsible. Instead, we can aim for thoughtful management that:
- Recognizes individual differences rather than treating all puppies identically
- Uses diagnostic testing to guide treatment decisions when practical
- Considers individual risk factors and lifestyle
- Maintains regular monitoring through appropriate fecal testing
- Works with qualified veterinary professionals
This approach respects both the wisdom of experienced breeders and the possibilities that modern diagnostics offer.
Implementing Fecal Testing for Puppies
For Puppies:
- Consider testing around 4-6 weeks if no clinical signs are present
- Follow veterinary guidance for initial treatments in high-risk situations
- Transition to test-based protocols as they mature
- Ask your vet about deworming schedule alternatives
For Adult Dogs:
- Annual or bi-annual fecal testing, with treatment based on results and risk assessment
- More frequent testing for high-risk animals or those showing symptoms
Working with Your Veterinarian:
Whether you choose scheduled deworming, testing first, or a combination approach, your veterinarian is your best resource. They understand local parasite prevalence, can interpret test results, and will help you develop an appropriate protocol for your specific situation. For additional veterinary resources and helpful tools, visit our useful links page.

The Bottom Line on Puppy Deworming
While schedule-based deworming has been widely used by many breeders, as diagnostic tools become more available and affordable, we have the opportunity to be more precise in our approach.
A testing-first strategy doesn’t reject traditional wisdom—it builds upon it. By combining the experience of successful breeding practices with modern diagnostic capabilities, we can make more informed decisions about each individual dog’s needs.
The most important thing is maintaining your dogs’ health through consistent, thoughtful care. Work with your veterinarian to develop a parasite management plan that considers your specific situation, resources, and philosophy. Whether you choose schedule-based treatment, testing-first approaches, or a combination of both, the key is staying attentive to your dogs’ individual needs and health status.
Frequently Asked Questions About Dog Deworming
Should you deworm puppies without testing first?
No. Fecal testing first identifies specific parasites and guides targeted treatment, reducing unnecessary medication while ensuring effective parasite control.
How often should dogs be tested for parasites?
Puppies need testing 3-4 times in their first year; healthy adults need testing twice yearly.
Can natural methods help control dog parasites?
Natural methods support parasite control but should never replace proven treatments when parasites are confirmed. Ground pumpkin seeds, good nutrition, and environmental management help, but aren’t substitutes for proper medication.
When should you test vs treat immediately?
Test when dogs appear healthy; treat immediately when symptoms are present or in high-risk situations. Puppies showing clinical signs (pale gums, poor growth, diarrhea) need immediate treatment.
What parasites affect dogs beyond just worms?
Dogs can be affected by both worms (roundworms, hookworms, whipworms, tapeworms) and non-worm parasites (coccidia, giardia). Each type requires specific medication.
How much does fecal testing cost?
Fecal testing typically costs $25-75 per test, depending on your location and the type of test. Many veterinarians can run basic tests in-house with same-day results.
Do all puppies in a litter need individual testing?
No. Since puppies share food bowls, sleeping areas, and play spaces, testing one or two representative puppies from a litter usually provides accurate information for the whole group.
Can healthy dogs have parasites?
Yes. Healthy adult dogs can harbor some parasites without developing clinical disease. The key is distinguishing between manageable parasite loads and problematic infections.
What are the signs that a puppy needs deworming?
Signs include pale gums, poor growth, diarrhea, distended abdomen, lethargy, or visible worms in stool. Puppies showing these symptoms need immediate veterinary attention.
How long does fecal testing take?
Most veterinarians can run basic fecal tests in-house with results available the same day. Some specialized tests may take 1-2 days if sent to an outside laboratory.
Can I test my dog for worms at home?
While home test kits exist, veterinary fecal testing is more accurate and can identify specific parasite types, allowing for targeted treatment.
Is it safe to skip routine deworming if my dog looks healthy?
For healthy adult dogs, testing first is often safer than routine deworming, as it avoids unnecessary medication and reduces drug resistance development.
How do dogs get worms?
Dogs get worms through contaminated soil, infected animal feces, nursing from infected mothers, or eating infected prey animals.
Scientific Research Supporting Testing-Based Approaches:
Evidence for Fecal Egg Count Testing:
- Cornell University: Fecal Parasite Count Reduction Testing – Official veterinary diagnostic protocol for testing effectiveness
- University of Maryland Extension: Fecal Egg Count Reduction Test – Research showing targeted treatment reduces resistance development
- Utah State University: Fecal Egg Count Tests Improve Deworming Programs – Evidence that testing allows more effective parasite management
Anthelmintic Resistance Research:
- Multiple Drug Resistance in Canine Hookworms – Parasites & Vectors – Peer-reviewed study documenting widespread resistance from routine deworming
- Spread of Anthelmintic Resistance in Dogs and Cats – PMC – Comprehensive review warning of resistance development and recommending targeted treatment
- Efficacy of Targeted Deworming Confirmed – EQUUS Magazine – Three-year study showing testing-based protocols reduce resistance 2-3 times slower than routine deworming
Veterinary Guidelines and Resources:
- Companion Animal Parasite Council Guidelines – Professional parasite management recommendations
- VCA Animal Hospitals – Routine Fecal Testing – Clinical guidance supporting regular testing
- University of Florida: Guide to Fecal Egg Counting – Technical guide for implementing FEC testing
Related Articles:
- 3 Challenges Puppy Parents Face – Common issues new puppy owners encounter
- Debunking Some Myths – Separating fact from fiction in dog care
- Finding the Best Breeder – What to look for when choosing a responsible breeder
- Natural Flea Control – Chemical-free approaches to flea prevention



